Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804544.1_cds_XP_016489266.1_7961
CDS Infomation

[gene=LOC107809173] [db_xref=GeneID:107809173] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like isoform X3] [protein_id=XP_016489266.1] [location=complement(join(21082..21102,21360..21443,21966..22369,22892..23021,23231..23347,23437..23526,23765..23864,23985..24034,24133..24234,24324..24401,24510..24776,24883..24982,25814..25824))] [gbkey=CDS]
Sequence

ATGATGCTAAGGTTTCTGAAAGCAAGAAAGTTTGATATTGATAAAGCAAAGCATATGTGG
GCTGATATGCTTCAGTGGAGGAAGGAATTTGGTGCTGACACCATTATCCATGATTTTCAA
TTCCAAGAGCAGGATGAAGTTTCGAAATACTATCCCCAAGGTTACCACGGGATTGATAAG
GAGGGAAGACCGGTATACATTGAAAGGCTAGGGAAAGTTGATCCTAACAAACTTATGCAA
GTCACAACAATGGACCGTTACATAAGAAACCATGTAAGAGAGTTCGAGAAAACTTTTGCA
ATCAAGTTTCCAGCATGTACAGTTGCTGCTAAAAGGCAGATTGATTCTAGCACCACTCTT
TTGGACGTCCAGGGAGTGGGTTTGAAAAACTTTAACAAGAGTGCAAGAGAGCTCATTGTG
CGACTTCAGAAGATTGATGGTGATAATTATCCTGAGACACTTCATCAGATGTTTATCATC
AATGCTGGACCTGGCTTTAGGCTGCTGTGGAATACTGTTAAGAGTTTTCTGGATCCCAAG
ACCACCTCCAAGATACATGTTCTTGGAAACAAGTACCAAAACAAGTTGCTTGAAATAGTT
GATGCTAGTGAGTTGCCAGAGTTTCTTGGTGGAACCTGTACATGTGCAGATCAAGGAGGT
TGCCTTCGTTCAGATAAAGGGCCATGGCAAAATCCGGAGATACTAAAGATGATTGGTGAA
GCACGGCGTGCCAGGCAGGTCGTTAAAGTTGTAAACAGTGAAGGCAAGGTAGTTTACGCT
AAACCTCGCTTCCCCACGCAGGTAAAAGGTAGTGATACCTCCACCGCTGAATCAGGATCT
GAAGCTGAAGATATTGCTTCCCCTAAAGCTGTAAGGAATTATTCCCATCTTCGGCTTACT
CCTGTTCGTGAAGAGGCTAAGGCTGGAACCTCAGGCTACACTACAAACTTCTCTGGATAT
GATGAATATGTTCCCATGGTTGACAAGGCAGTTGATTCTGTGTGGAAGAAACAAACATCC
TTTCAAAGAGCTGCCATTTCCAAAGGGATGCTTCCACCAGCAGATTCTCAAAAGCCCGTA
GGTGGTCTTAGTACTCGGATATTAGGACTTCTTCTGGCCTTCTTCACGACTGTGATGATG
TTTTTCCGTTCAGTGCTATGCCGTGTAACCAAGAAACTTCCTGATCCATCAAATGGTCAA
GCCCAAGCAGTTCAAGAATTCACCTCTGATGCAATCAGTAAAGAGGAGTTTCGGCCACCT
TCACCAATTCCAGCCTTTACAGAAGCGCAGCTGCTTTCTGTTGTTCTGAAGAAATTGGGT
GAACTTGAGGGCAAAGTAAATACACTTCAAGAAAAGCCATCTGAGATGCCTTATGAGAAA
GAGGAATTGCTAAATGCTGCTGTTTGCCGTGTGGATGCCCTAGAAGCTGAGTTAATTGCA
ACCAAGAAGGCTTTGCATGAGGCTTTGATGAGACAAGAGGAACTTCTTGCATACATTGCT
GGTCAAGAAGCTGCGAAAGCTGCAAAATTTCAGAAAAAGAAGTTTTGCTTTTAA

Peptide Sequence

PEP ID

XP_016489266.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like isoform X3 [Nicotiana tabacum]
Sequence

MMLRFLKARKFDIDKAKHMWADMLQWRKEFGADTIIHDFQFQEQDEVSKYYPQGYHGIDK
EGRPVYIERLGKVDPNKLMQVTTMDRYIRNHVREFEKTFAIKFPACTVAAKRQIDSSTTL
LDVQGVGLKNFNKSARELIVRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPK
TTSKIHVLGNKYQNKLLEIVDASELPEFLGGTCTCADQGGCLRSDKGPWQNPEILKMIGE
ARRARQVVKVVNSEGKVVYAKPRFPTQVKGSDTSTAESGSEAEDIASPKAVRNYSHLRLT
PVREEAKAGTSGYTTNFSGYDEYVPMVDKAVDSVWKKQTSFQRAAISKGMLPPADSQKPV
GGLSTRILGLLLAFFTTVMMFFRSVLCRVTKKLPDPSNGQAQAVQEFTSDAISKEEFRPP
SPIPAFTEAQLLSVVLKKLGELEGKVNTLQEKPSEMPYEKEELLNAAVCRVDALEAELIA
TKKALHEALMRQEELLAYIAGQEAAKAAKFQKKKFCF

Transcript Sequence

Gene sequence data has not been registered.